What was controversial about the election and Jefferson’s win?

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The election of 1800 was controversial because it was the first time in American history that power had been peacefully transferred from one political party to another. Jefferson's victory over John Adams was also controversial because it marked the first time a president had been elected without winning the majority of the electoral vote. The election was ultimately decided by the House of Representatives, and Jefferson's victory was seen as a victory for the Democratic-Republican Party over the Federalist Party.